Both ways are commonly used. Because new barrels/guns are getting faster as they break-in, it seems like the ideal time to do the seating depth test and tweak. I haven't found the ideal seating depth to change at all with different powders or charges. If I can get half the equation done, it makes quick work of finding the right powder. Been more than a few times that I determined the powder was completely wrong with with less than a dozen shots. It also makes reading groups much easier.
Good luck.